Whole genome sequencing of Z. mays ssp. mays inbred line CAU178 - SRA

SRX131367: Whole genome sequencing of Z. mays ssp. mays inbred line CAU178
1 ILLUMINA (Illumina Genome Analyzer IIx) run: 10M spots, 1G bases, 622.6Mb downloads

Design: Corvaris sheared total genomic DNA was prepared per Illumina paired-end library protocol, ultimately capturing fragments in the 250nt range and delivered for 76-100bp paired-end sequencing on the Genome Analyzer IIx platform.

Submitted by: Cold Spring Harbor Laboratory

Study: Capturing Extant Variation from a Genome in Flux: Maize HapMap II

• SRP011907 • All experiments • All runs

show Abstracthide Abstract

A comprehensive characterization of genetic variation across 103 inbred lines representing a wide breadth of the Zea mays lineage: 60 improved maize lines including the parents of the maize nested association mapping (NAM) population, 23 maize landraces, and 19 wild relatives.

Sample: Whole genome sequencing of Z. mays ssp. mays inbred line CAU178

SAMN00839350 • SRS302412 • All experiments • All runs

Organism: Zea mays

Library:

Name: CAU178_library

Instrument: Illumina Genome Analyzer IIx

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward76 reverse

Runs: 1 run, 10M spots, 1G bases, 622.6Mb

Run	# of Spots	# of Bases	Size	Published
SRR448030	10,000,000	1G	622.6Mb	2012-05-22

ID:: 149499

SRA

Sequence Read Archive

Result Filters

Send to:

Supplemental Content

Related information

Recent activity